Program, Pipeline Name or Method Name

Flye, Juicer/3ddna/juicebox

Program, Pipeline or Method version

2.8-b1674, 1.5.7, 170123, 1.11

Source Name

Rick Masonbrink

Time Executed

Dec. 1, 2022, 2:20 p.m.

Category

Other

Description

This genome was assembled with FLYE, polished with Medaka and Racon. Then this assembly was scaffolded using the Juicer/3ddna/Juicebox pipeline. The resulting assembly contains 6,979 scaffolds at a size of 1,272,566,122 base pairs with an L90 of 75.

File

SoftmaskedFiltered2Halcra_medaka.FINAL.fasta

Index

SoftmaskedFiltered2Halcra_medaka.FINAL.fasta.fai